BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C07LP1|AL429190
(955 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1290 1716 0.0
>3x_Contig1290
Length = 6501
Score = 1716 bits (863), Expect = 0.0
Identities = 938/956 (98%), Gaps = 8/956 (0%)
Strand = Plus / Minus
Query: 1 gatggttgagcagtgaattkaggctgtacctgttgggtgaactaaaaaagaaattgctgt 60
||||||||||||||||||| ||||||||||||||||||||||| | | |||||||||
Sbjct: 2161 gatggttgagcagtgaattgaggctgtacctgttgggtgaactgaggttgtaattgctgt 2102
Query: 61 gtagaattgagaggttgcacttgttgtgtaaacatgaggttgaacctgttgtgtaaactg 120
|| |||||| | |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2101 gt-gaattggg--gttgcacttgttgtgtaaac-tgaggttgaacctgttgtgtaaactg 2046
Query: 121 agagttgaacttgttgtgccaatgcttgtacctgggcctgctgcattgccgcataggagt 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2045 ag-gttgaacttgttgtgccaatgcttgtacctgggcctgctgcattgccgcataggagt 1987
Query: 181 tttgatctacataaatttggccggtagttggatcatagtattgttgtaccccatcgaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1986 tttgatctacataaatttggccggtagttggatcatagtattgttgtaccccatcgaata 1927
Query: 241 ctgctgggcgaggttctgccgatgctgtactaggtaggcttggttcacttgttccatcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1926 ctgctgggcgaggttctgccgatgctgtactaggtaggcttggttcacttgttccatcga 1867
Query: 301 aaacggcttcttgcactttgttgtccggcctttttggaagcggaggtctgtctccttctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1866 aaacggcttcttgcactttgttgtccggcctttttggaagcggaggtctgtctccttctc 1807
Query: 361 ttgatcttggtctactgctggcagatgaggcagaacggtttcttctggacccggacgcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1806 ttgatcttggtctactgctggcagatgaggcagaacggtttcttctggacccggacgcag 1747
Query: 421 atgatgggcgggatgacttgtagtccaattgtgacgaatcatcctctagattgamatctt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1746 atgatgggcgggatgacttgtagtccaattgtgacgaatcatcctctagattgaaatctt 1687
Query: 481 ccaccttgacagcggtatgtctgaacttaccctttaaatatttatccctgataaacattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1686 ccaccttgacagcggtatgtctgaacttaccctttaaatatttatccctgataaacattt 1627
Query: 541 caacggcagtacgatcctcgtcaccgtcaaatgggaaaggttctttcttagggttccaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1626 caacggcagtacgatcctcgtcaccgtcaaatgggaaaggttctttcttagggttccaaa 1567
Query: 601 aactgctgttatgtttgtttcctccaagatcggcaacagtttgaacgtcacgcttagacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1566 aactgctgttatgtttgtttcctccaagatcggcaacagtttgaacgtcacgcttagacc 1507
Query: 661 atctatcaagagataaagatttcacgatactagtagcaccatcttctctgctgcctaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1506 atctatcaagagataaagatttcacgatactagtagcaccatcttctctgctgcctaaca 1447
Query: 721 ctttcctatgtacggaagcacaccgaccgcacaagaatacacccaagttcactgaacagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1446 ctttcctatgtacggaagcacaccgaccgcacaagaatacacccaagttcactgaacagt 1387
Query: 781 aggtagggaatggtgt-ccacattcaccacatttatttgaattctcaccagcgttaa-sa 838
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1386 aggtagggaatggtgtcccacattcaccacatttatttgaattctcaccagcgttaagca 1327
Query: 839 aaaactttaaatcatgttctacagattcacctcttgatcgtctcatttttggtttcctcg 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 aaaactttaaatcatgttctacagattcacctcttgatcgtctcatttttggtttcctcg 1267
Query: 899 cttcagtatctcctcaataaaccttacctaaactcgactagtcc-atttgggaccc 953
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1266 cttcagtatctcctcaataaaccttacctaaactcgactagtccaatttgggaccc 1211
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5831
Number of Sequences: 1807
Number of extensions: 5831
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 955
length of database: 10,358,551
effective HSP length: 16
effective length of query: 939
effective length of database: 10,329,639
effective search space: 9699531021
effective search space used: 9699531021
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)